2REM

Crystal Structure of oxidoreductase DsbA from Xylella fastidiosa


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.224 
  • R-Value Work: 0.183 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Residues substitution in the active site of DSBA may compensate for the lack of the canonical motif CPHC

Rinaldi, F.C.Guimaraes, B.G.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Disulfide oxidoreductase
A, B, C
193Xylella fastidiosa (strain 9a5c)Mutation(s): 0 
Find proteins for Q9PDE3 (Xylella fastidiosa (strain 9a5c))
Go to UniProtKB:  Q9PDE3
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
8 residue peptide
T
8N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
UNK
Query on UNK
T
L-PEPTIDE LINKINGC4 H9 N O2

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Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.224 
  • R-Value Work: 0.183 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 200.117α = 90.00
b = 41.722β = 95.87
c = 79.807γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
DENZOdata reduction
HKL-2000data reduction
HKL-2000data scaling
SCALEPACKdata scaling
PDB_EXTRACTdata extraction
CBASSdata collection
SHARPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2008-10-07
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2017-10-25
    Type: Advisory, Refinement description