2QMP

Crystal Structure of HIV-1 protease complexed with PL-100

  • Classification: HYDROLASE
  • Mutation(s): No 

  • Deposited: 2007-07-16 Released: 2008-07-22 
  • Deposition Author(s): Allison, T.J.

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.80 Å
  • R-Value Free: 0.248 
  • R-Value Work: 0.205 
  • R-Value Observed: 0.207 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Crystal Structure of HIV-1 protease complexed with PL-100

Coburn, C.A.Allison, T.J.Holloway, M.K.Wu, J.J.Wainberg, M.A.Vacca, J.P.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Pol polyproteinA, B99N/AMutation(s): 0 
EC: 3.4.23.16
Find proteins for Q9WFL7 (Human immunodeficiency virus 1)
Explore Q9WFL7 
Go to UniProtKB:  Q9WFL7
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
A00
Query on A00

Download CCD File 
A, B
N-[(5S)-5-{[(4-aminophenyl)sulfonyl](isobutyl)amino}-6-hydroxyhexyl]-Nalpha-(methoxycarbonyl)-beta-phenyl-L-phenylalaninamide
C33 H44 N4 O6 S
QAHLFXYLXBBCPS-IZEXYCQBSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.80 Å
  • R-Value Free: 0.248 
  • R-Value Work: 0.205 
  • R-Value Observed: 0.207 
  • Space Group: P 21 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 57.79α = 90
b = 85.98β = 90
c = 46.19γ = 90
Software Package:
Software NamePurpose
d*TREKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction
CrystalCleardata collection
d*TREKdata reduction
MOLREPphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

  • Deposited Date: 2007-07-16 
  • Released Date: 2008-07-22 
  • Deposition Author(s): Allison, T.J.

Revision History 

  • Version 1.0: 2008-07-22
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance