2QJ1

Crystal structure of infectious bursal disease virus VP1 polymerase incubated with an oligopeptide mimicking the VP3 C-terminus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.48 Å
  • R-Value Free: 0.281 
  • R-Value Work: 0.241 
  • R-Value Observed: 0.243 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Unprecedented activation mechanism of a non-canonical RNA-dependent RNA polymerase

Garriga, D.Navarro, A.Querol-Audi, J.Abaitua, F.Rodriguez, J.F.Verdaguer, N.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Infectious bursal disease virus VP1 polymeraseA852Infectious bursal disease virusMutation(s): 0 
Gene Names: VP1
EC: 2.7.7.48
UniProt
Find proteins for Q9Q6Q5 (Avian infectious bursal disease virus)
Explore Q9Q6Q5 
Go to UniProtKB:  Q9Q6Q5
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.48 Å
  • R-Value Free: 0.281 
  • R-Value Work: 0.241 
  • R-Value Observed: 0.243 
  • Space Group: P 61 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 121.913α = 90
b = 121.913β = 90
c = 359.426γ = 120
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction
ProDCdata collection
AMoREphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2007-11-27
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2017-10-18
    Changes: Advisory, Refinement description