Biological Assembly 1  

 3D View: Structure | Electron Density | Ligand Interaction

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Protein Workshop | Ligand Explorer

Global Symmetry: Dihedral - D3  (3D View)
Global Stoichiometry: Homo 6-mer - A6 

Biological assembly 1 assigned by authors and generated by PQS (software)

Biological Assembly 2  

 3D View: Structure | Electron Density | Ligand Interaction

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Protein Workshop | Ligand Explorer

Global Symmetry: Cyclic - C2  (3D View)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 2 generated by PISA (software)

Biological Assembly 3  

 3D View: Structure | Electron Density | Ligand Interaction

Standalone Viewers  
Protein Workshop | Ligand Explorer

Global Symmetry: Cyclic - C2  (3D View)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 3 generated by PISA (software)

Biological Assembly 4  

 3D View: Structure | Electron Density | Ligand Interaction

Standalone Viewers  
Protein Workshop | Ligand Explorer

Global Symmetry: Cyclic - C2  (3D View)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 4 generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 304649.78 
• Atom Count: 19819 
• Residue Count: 2730 
• Unique protein chains: 1

2QEZ

Crystal structure of ethanolamine ammonia-lyase heavy chain (YP_013784.1) from Listeria monocytogenes 4b F2365 at 2.15 A resolution

• DOI: 10.2210/pdb2QEZ/pdb

• Classification: LYASE
• Expression System: Escherichia coli


• Deposited: 2007-06-26 Released: 2007-07-10 
• Deposition Author(s): Joint Center for Structural Genomics (JCSG)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.15 Å
• R-Value Free: 0.279 
• R-Value Work: 0.228 

Literature

Crystal structure of ethanolamine ammonia-lyase heavy chain (YP_013784.1) from Listeria monocytogenes 4b F2365 at 2.15 A resolution

Joint Center for Structural Genomics (JCSG)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
Ethanolamine ammonia-lyase heavy chain	A, B, C, D, E, F	455	N/A	Mutation(s): 0
Protein Feature View is not available: No corresponding UniProt sequence found.

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram & Interactions
GOL	A, C, D, F	GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A, B, C, D, E, F	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.15 Å
• R-Value Free: 0.279 
• R-Value Work: 0.228 
• Space Group: P 2₁ 2₁ 2
• Diffraction Data DOI: 
  10.18430/M32QEZ Protein Diffraction

Unit Cell:

Length (Å)	Angle (°)
a = 188.330	α = 90.00
b = 223.700	β = 90.00
c = 65.930	γ = 90.00

Software Package:

Software Name	Purpose
PHENIX	refinement
SHELXD	phasing
MAR345	data collection
REFMAC	refinement
PDB_EXTRACT	data extraction
SHELX	phasing
XDS	data reduction
XSCALE	data scaling
SHARP	phasing
MolProbity	model building

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 2007-06-26 
• Released Date: 2007-07-10 
• Deposition Author(s): Joint Center for Structural Genomics (JCSG)

Revision History 

• Version 1.0: 2007-07-10
  Type: Initial release
• Version 1.1: 2008-05-01
  Type: Version format compliance
• Version 1.2: 2011-07-13
  Type: Derived calculations, Source and taxonomy, Version format compliance
• Version 1.3: 2017-10-18
  Type: Refinement description