2Q1L

Design and Synthesis of Pyrrole-based, Hepatoselective HMG-CoA Reductase Inhibitors


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.263 
  • R-Value Work: 0.223 

wwPDB Validation 3D Report Full Report


This is version 1.4 of the entry. See complete history

Literature

Design and synthesis of hepatoselective, pyrrole-based HMG-CoA reductase inhibitors.

Pfefferkorn, J.A.Song, Y.Sun, K.L.Miller, S.R.Trivedi, B.K.Choi, C.Sorenson, R.J.Bratton, L.D.Unangst, P.C.Larsen, S.D.Poel, T.J.Cheng, X.M.Lee, C.Erasga, N.Auerbach, B.Askew, V.Dillon, L.Hanselman, J.C.Lin, Z.Lu, G.Robertson, A.Olsen, K.Mertz, T.Sekerke, C.Pavlovsky, A.Harris, M.S.Bainbridge, G.Caspers, N.Chen, H.Eberstadt, M.

(2007) Bioorg.Med.Chem.Lett. 17: 4538-4544

  • DOI: 10.1016/j.bmcl.2007.05.096

  • PubMed Abstract: 
  • This manuscript describes the design and synthesis of a series of pyrrole-based inhibitors of HMG-CoA reductase for the treatment of hypercholesterolemia. Analogs were optimized using structure-based design and physical property considerations result ...

    This manuscript describes the design and synthesis of a series of pyrrole-based inhibitors of HMG-CoA reductase for the treatment of hypercholesterolemia. Analogs were optimized using structure-based design and physical property considerations resulting in the identification of 44, a hepatoselective HMG-CoA reductase inhibitor with excellent acute and chronic efficacy in a pre-clinical animal models.


    Organizational Affiliation

    Pfizer Global Research & Development, Michigan Laboratories, 2800 Plymouth Road, Ann Arbor, MI 48105, USA. jeffrey.a.pfefferkorn@pfizer.com




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
3-hydroxy-3-methylglutaryl-coenzyme A reductase
A, B, C, D
441Homo sapiensMutation(s): 1 
Gene Names: HMGCR
EC: 1.1.1.34
Find proteins for P04035 (Homo sapiens)
Go to Gene View: HMGCR
Go to UniProtKB:  P04035
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
882
Query on 882

Download SDF File 
Download CCD File 
A, C, D
(3R,5R)-7-[5-(ANILINOCARBONYL)-3,4-BIS(4-FLUOROPHENYL)-1-ISOPROPYL-1H-PYRROL-2-YL]-3,5-DIHYDROXYHEPTANOIC ACID
C33 H34 F2 N2 O5
VZMMUQFHUUOVEM-KAYWLYCHSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
882IC50: 1.8 nM (99) BINDINGDB
882IC50: 12.4 nM BINDINGMOAD
882IC50: 12.4 nM PDBBIND
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.263 
  • R-Value Work: 0.223 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 74.732α = 90.00
b = 176.958β = 118.83
c = 76.735γ = 90.00
Software Package:
Software NamePurpose
SCALEPACKdata scaling
DENZOdata reduction
PDB_EXTRACTdata extraction
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2007-07-17
    Type: Initial release
  • Version 1.1: 2008-05-01
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance
  • Version 1.3: 2012-02-15
    Type: Database references
  • Version 1.4: 2017-10-18
    Type: Refinement description