2Q1L

Design and Synthesis of Pyrrole-based, Hepatoselective HMG-CoA Reductase Inhibitors


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.263 
  • R-Value Work: 0.223 
  • R-Value Observed: 0.225 

wwPDB Validation 3D Report Full Report


This is version 1.4 of the entry. See complete history


Literature

Design and synthesis of hepatoselective, pyrrole-based HMG-CoA reductase inhibitors.

Pfefferkorn, J.A.Song, Y.Sun, K.L.Miller, S.R.Trivedi, B.K.Choi, C.Sorenson, R.J.Bratton, L.D.Unangst, P.C.Larsen, S.D.Poel, T.J.Cheng, X.M.Lee, C.Erasga, N.Auerbach, B.Askew, V.Dillon, L.Hanselman, J.C.Lin, Z.Lu, G.Robertson, A.Olsen, K.Mertz, T.Sekerke, C.Pavlovsky, A.Harris, M.S.Bainbridge, G.Caspers, N.Chen, H.Eberstadt, M.

(2007) Bioorg Med Chem Lett 17: 4538-4544

  • DOI: 10.1016/j.bmcl.2007.05.096
  • Structures With Same Primary Citation

  • PubMed Abstract: 
  • This manuscript describes the design and synthesis of a series of pyrrole-based inhibitors of HMG-CoA reductase for the treatment of hypercholesterolemia. Analogs were optimized using structure-based design and physical property considerations result ...

    This manuscript describes the design and synthesis of a series of pyrrole-based inhibitors of HMG-CoA reductase for the treatment of hypercholesterolemia. Analogs were optimized using structure-based design and physical property considerations resulting in the identification of 44, a hepatoselective HMG-CoA reductase inhibitor with excellent acute and chronic efficacy in a pre-clinical animal models.


    Organizational Affiliation

    Pfizer Global Research & Development, Michigan Laboratories, 2800 Plymouth Road, Ann Arbor, MI 48105, USA. jeffrey.a.pfefferkorn@pfizer.com



Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
3-hydroxy-3-methylglutaryl-coenzyme A reductase
A, B, C, D
441Homo sapiensMutation(s): 1 
Gene Names: HMGCR
EC: 1.1.1.34
Find proteins for P04035 (Homo sapiens)
Go to UniProtKB:  P04035
NIH Common Fund Data Resources
PHAROS  P04035
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
882
Query on 882

Download CCD File 
A, C, D
(3R,5R)-7-[5-(ANILINOCARBONYL)-3,4-BIS(4-FLUOROPHENYL)-1-ISOPROPYL-1H-PYRROL-2-YL]-3,5-DIHYDROXYHEPTANOIC ACID
C33 H34 F2 N2 O5
VZMMUQFHUUOVEM-KAYWLYCHSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
882IC50:  12.399999618530273   nM  Binding MOAD
882IC50 :  12.399999618530273   nM  PDBBind
882IC50:  1.7999999523162842   nM  BindingDB
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.263 
  • R-Value Work: 0.223 
  • R-Value Observed: 0.225 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 74.732α = 90
b = 176.958β = 118.83
c = 76.735γ = 90
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2007-07-17
    Type: Initial release
  • Version 1.1: 2008-05-01
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2012-02-15
    Changes: Database references
  • Version 1.4: 2017-10-18
    Changes: Refinement description