2PG0

Crystal structure of acyl-CoA dehydrogenase from Geobacillus kaustophilus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.205 

wwPDB Validation 3D Report Full Report


This is version 1.4 of the entry. See complete history

Literature

Crystal structure of acyl-CoA dehydrogenase from G. kaustophilus

Chen, L.Chen, L.-Q.Ebihara, A.Shinkai, A.Kuramitsu, S.Yokoyama, S.Zhao, M.Li, Y.Fu, Z.-Q.Rose, J.P.Wang, B.-C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Acyl-CoA dehydrogenase
A, B
385Geobacillus kaustophilus (strain HTA426)Mutation(s): 0 
Find proteins for Q5L0D5 (Geobacillus kaustophilus (strain HTA426))
Go to UniProtKB:  Q5L0D5
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
FAD
Query on FAD

Download SDF File 
Download CCD File 
A, B
FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.205 
  • Space Group: P 31 2 1
Unit Cell:
Length (Å)Angle (°)
a = 119.276α = 90.00
b = 119.276β = 90.00
c = 124.452γ = 120.00
Software Package:
Software NamePurpose
SCALEPACKdata scaling
DENZOdata reduction
REFMACrefinement
PDB_EXTRACTdata extraction
HKL-2000data reduction
SERGUIdata collection
SOLVEphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2007-05-08
    Type: Initial release
  • Version 1.1: 2008-05-01
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Derived calculations, Source and taxonomy, Version format compliance
  • Version 1.3: 2017-09-13
    Type: Refinement description
  • Version 1.4: 2018-01-24
    Type: Database references, Structure summary