2PA1

Structure of the PDZ domain of human PDLIM2 bound to a C-terminal extension from human beta-tropomyosin


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.192 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Structure of the PDZ domain of human PDLIM2 bound to a C-terminal extension from human beta-tropomyosin.

Uppenberg, J.Shrestha, L.Elkins, J.Burgess-Brown, N.Salah, E.Bunkoczi, G.Papagrigoriou, E.Pike, A.C.W.Turnbull, A.P.Ugochukwu, E.Umeano, C.von Delft, F.Weigelt, J.Arrowsmith, C.H.Edwards, A.Sundstrom, M.Doyle, D.A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PDZ and LIM domain protein 2
A
87Homo sapiensGene Names: PDLIM2
Find proteins for Q96JY6 (Homo sapiens)
Go to Gene View: PDLIM2
Go to UniProtKB:  Q96JY6
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CL
Query on CL

Download SDF File 
Download CCD File 
A
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.192 
  • Space Group: P 61
Unit Cell:
Length (Å)Angle (°)
a = 58.770α = 90.00
b = 58.770β = 90.00
c = 52.340γ = 120.00
Software Package:
Software NamePurpose
PHASERphasing
MAR345data collection
PDB_EXTRACTdata extraction
XDSdata reduction
REFMACrefinement
XDSdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2007-05-01
    Type: Initial release
  • Version 1.1: 2008-05-01
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Advisory, Version format compliance
  • Version 1.3: 2017-10-18
    Type: Refinement description