2P8G

Crystal structure of phenolic acid decarboxylase (2635953) from Bacillus subtilis at 1.36 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.36 Å
  • R-Value Free: 0.146 
  • R-Value Work: 0.133 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Crystal structure of phenolic acid decarboxylase (2635953) from Bacillus subtilis at 1.36 A resolution

Joint Center for Structural Genomics (JCSG)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Phenolic acid decarboxylase
A
162Bacillus subtilis (strain 168)Mutation(s): 1 
Gene Names: padC (pad, yveH)
EC: 4.1.1.102
Find proteins for O07006 (Bacillus subtilis (strain 168))
Go to UniProtKB:  O07006
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EDO
Query on EDO

Download SDF File 
Download CCD File 
A
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 117.475α = 90.00
b = 117.475β = 90.00
c = 117.475γ = 90.00
Software Package:
Software NamePurpose
MOSFLMdata reduction
CCP4data scaling
PDB_EXTRACTdata extraction
PHASERphasing
ADSCdata collection
REFMACrefinement
MolProbitymodel building
SCALAdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2007-04-17
    Type: Initial release
  • Version 1.1: 2008-05-01
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Advisory, Version format compliance
  • Version 1.3: 2017-10-18
    Type: Refinement description