2P4F

Crystal Structure of Atp11 functional domain from Candida Glabrata

• PDB DOI: https://doi.org/10.2210/pdb2P4F/pdb

• Classification: CHAPERONE
• Organism(s): Nakaseomyces glabratus CBS 138
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2007-03-12 Released: 2008-03-11 
• Deposition Author(s): Ludlam, A.V., Brunzelle, J.S., Gatti, D.L., Ackerman, S.H.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.40 Å
• R-Value Free: 0.186 
• R-Value Work: 0.145 
• R-Value Observed: 0.145 

Literature

Crystal Structure of Atp11 functional domain from Candida Glabrata

Ludlam, A.V., Brunzelle, J.S., Pribyl, T., Gatti, D.L., Ackerman, S.H.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 34.69 kDa 
• Atom Count: 1,764 
• Modelled Residue Count: 193 
• Deposited Residue Count: 299 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Similar to sp|P32453 Saccharomyces cerevisiae YNL315c ATP11	A	299	Nakaseomyces glabratus CBS 138	Mutation(s): 0  Gene Names: CAGL0M04037g
UniProt
Find proteins for Q6FJS2 (Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138)) Explore Q6FJS2  Go to UniProtKB:  Q6FJS2

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
P6G	B [auth A]	HEXAETHYLENE GLYCOL C12 H26 O7 IIRDTKBZINWQAW-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.40 Å
• R-Value Free: 0.186 
• R-Value Work: 0.145 
• R-Value Observed: 0.145 
• Space Group: I 4₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 63.187	α = 90
b = 63.187	β = 90
c = 153.577	γ = 90

Software Package:

Software Name	Purpose
SHELXL-97	refinement
SCALEPACK	data scaling
CNS	phasing
REFMAC	refinement
PDB_EXTRACT	data extraction
HKL-2000	data collection
HKL-2000	data reduction
SHELX	phasing
DENZO	data reduction

Structure Validation

Entry History 

Deposition Data

• Released Date: 2008-03-11 
Deposition Author(s): Ludlam, A.V., Brunzelle, J.S., Gatti, D.L., Ackerman, S.H.

Revision History  

• Version 1.0: 2008-03-11
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2011-08-17
  Changes: Other
• Version 1.3: 2017-10-18
  Changes: Refinement description
• Version 1.4: 2019-07-24
  Changes: Data collection, Refinement description
• Version 1.5: 2024-02-21
  Changes: Data collection, Database references, Derived calculations