2OZU | pdb_00002ozu

Crystal structure of human MYST histone acetyltransferase 3 in complex with acetylcoenzyme A

• PDB DOI: https://doi.org/10.2210/pdb2OZU/pdb

• Classification: TRANSFERASE
• Organism(s): Homo sapiens
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): Yes 


• Deposited: 2007-02-27 Released: 2007-03-13 
• Deposition Author(s): Min, J., Wu, H., Dombrovski, L., Bernstein, G., Dong, A., Loppnau, P., Weigelt, J., Sundstrom, M., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Plotnikov, A.N., Structural Genomics Consortium (SGC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.30 Å
• R-Value Free: 
  0.245 (Depositor), 0.238 (DCC) 
• R-Value Work: 
  0.191 (Depositor), 0.182 (DCC) 
• R-Value Observed: 
  0.193 (Depositor) 

Literature

The crystal structure of human MYST histone acetyltransferase 3 in complex with acetylcoenzyme A

Wu, H., Min, J., Dombrovski, L., Bernstein, G., Loppnau, P., Weigelt, J., Sundstrom, M., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Plotnikov, A.N.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 34.63 kDa 
• Atom Count: 2,339 
• Modelled Residue Count: 254 
• Deposited Residue Count: 284 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Histone acetyltransferase MYST3	A	284	Homo sapiens	Mutation(s): 1  Gene Names: MYST3, MOZ, RUNXBP2, ZNF220 EC: 2.3.1.48
UniProt & NIH Common Fund Data Resources
Find proteins for Q92794 (Homo sapiens) Explore Q92794  Go to UniProtKB:  Q92794
PHAROS:  Q92794 GTEx:  ENSG00000083168

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ACO	C [auth A]	ACETYL COENZYME *A C23 H38 N7 O17 P3 S ZSLZBFCDCINBPY-ZSJPKINUSA-N
ZN	B [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N
ACM	D [auth A], E [auth A], F [auth A], G [auth A]	ACETAMIDE C2 H5 N O DLFVBJFMPXGRIB-UHFFFAOYSA-N

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
ALY	A	L-PEPTIDE LINKING	C8 H16 N2 O3		LYS

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.30 Å
• R-Value Free:  0.245 (Depositor), 0.238 (DCC) 
• R-Value Work:  0.191 (Depositor), 0.182 (DCC) 
• R-Value Observed: 0.193 (Depositor) 

Space Group: I 2 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 58.85	α = 90
b = 104.045	β = 90
c = 109.589	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
CrystalClear	data collection
HKL-2000	data reduction
HKL-2000	data scaling
MOLREP	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2007-03-13 
Deposition Author(s): Min, J., Wu, H., Dombrovski, L., Bernstein, G., Dong, A., Loppnau, P., Weigelt, J., Sundstrom, M., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Plotnikov, A.N., Structural Genomics Consortium (SGC)

Revision History  

• Version 1.0: 2007-03-13
  Type: Initial release
  
• Version 1.1: 2008-05-01
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Advisory, Version format compliance
• Version 1.3: 2024-12-25
  Changes: Advisory, Data collection, Database references, Derived calculations, Structure summary