2OCS

The crystal structure of the first PDZ domain of human NHERF-2 (SLC9A3R2)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.198 
  • R-Value Work: 0.152 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

The crystal structure of the first PDZ domain of human NHERF-2 (SLC9A3R2)

Papagrigoriou, E.Phillips, C.Gileadi, C.Elkins, J.Salah, E.Berridge, G.Savitsky, P.Gorrec, F.Umeano, C.Ugochukwu, E.Gileadi, O.Burgess, N.Edwards, A.Arrowsmith, C.H.Weigelt, J.Sundstrom, M.Doyle, D.A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Na(+)/H(+) exchange regulatory cofactor NHE-RF2
A
88Homo sapiensMutation(s): 0 
Gene Names: SLC9A3R2 (NHERF2)
Find proteins for Q15599 (Homo sapiens)
Go to Gene View: SLC9A3R2
Go to UniProtKB:  Q15599
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SCN
Query on SCN

Download SDF File 
Download CCD File 
A
THIOCYANATE ION
C N S
ZMZDMBWJUHKJPS-UHFFFAOYSA-M
 Ligand Interaction
EDO
Query on EDO

Download SDF File 
Download CCD File 
A
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.198 
  • R-Value Work: 0.152 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 26.556α = 90.00
b = 39.867β = 106.93
c = 37.278γ = 90.00
Software Package:
Software NamePurpose
MOSFLMdata reduction
PHASERphasing
REFMACrefinement
CCP4data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2007-01-16
    Type: Initial release
  • Version 1.1: 2008-05-01
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance
  • Version 1.3: 2017-10-18
    Type: Refinement description