2O7Q

Crystal Structure of the A. thaliana DHQ-dehydroshikimate-SDH-shikimate-NADP(H)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.214 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

The DHQ-dehydroshikimate-SDH-shikimate-NADP(H) Complex: Insights into Metabolite Transfer in the Shikimate Pathway

Singh, S.A.Christendat, D.

(2007) Cryst.Growth Des. 7: 2153-2160


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
A
523Arabidopsis thalianaMutation(s): 0 
Gene Names: EMB3004
Find proteins for Q9SQT8 (Arabidopsis thaliana)
Go to UniProtKB:  Q9SQT8
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
DHK
Query on DHK

Download SDF File 
Download CCD File 
A
3-DEHYDROSHIKIMATE
C7 H10 O5
YVYKOQWMJZXRRM-UYFOZJQFSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
CSO
Query on CSO
A
L-PEPTIDE LINKINGC3 H7 N O3 SCYS
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.214 
  • Space Group: P 32 2 1
Unit Cell:
Length (Å)Angle (°)
a = 96.611α = 90.00
b = 96.611β = 90.00
c = 115.945γ = 120.00
Software Package:
Software NamePurpose
CNSrefinement
SOLVEphasing
HKL-3000data collection
HKL-3000data reduction
HKL-3000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2007-11-20
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Derived calculations, Version format compliance