2NBL | pdb_00002nbl

Peptide model of 4-stranded beta-arch

PDB DOI: https://doi.org/10.2210/pdb2NBL/pdb
BMRB: 25982

Classification: DE NOVO PROTEIN
Organism(s): synthetic construct
Mutation(s): No

Deposited: 2016-03-05 Released: 2017-03-08
Deposition Author(s): Kung, V.M.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 10
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 2NBL

This is version 2.1 of the entry. See complete history.

Literature

A designed peptide model of early-stage amyloid structures

Kung, V.

To be published.

Macromolecule Content

Total Structure Weight: 3.48 kDa
Atom Count: 247
Modeled Residue Count: 31
Deposited Residue Count: 31
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Designed beta-arch	A	31	synthetic construct	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
Sequence Annotations Expand
Reference Sequence

Small Molecules

Modified Residues 2 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
DAL Query on DAL	A	D-PEPTIDE LINKING	C₃ H₇ N O₂		--
DPR Query on DPR	A	D-PEPTIDE LINKING	C₅ H₉ N O₂		--

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 10
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2017-03-08

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2017-03-08
Type: Initial release
Version 2.0: 2023-11-15
Changes: Advisory, Atomic model, Data collection, Database references, Derived calculations
Version 2.1: 2024-10-16
Changes: Database references, Structure summary