2MW7 | pdb_00002mw7

Solution NMR structure of a novel cysteine framework containing Conus peptide Mo3964


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with acceptable covalent geometry 

wwPDB Validation 3D Report Full Report

Validation slider image for 2MW7

This is version 1.3 of the entry. See complete history

Literature

A Disulfide Stabilized beta-Sandwich Defines the Structure of a New Cysteine Framework M-Superfamily Conotoxin

Kancherla, A.K.Meesala, S.Jorwal, P.Palanisamy, R.Sikdar, S.K.Sarma, S.P.

(2015) ACS Chem Biol 10: 1847-1860

  • DOI: https://doi.org/10.1021/acschembio.5b00226
  • Primary Citation Related Structures: 
    2MW7

  • PubMed Abstract: 

    The structure of a new cysteine framework (-C-CC-C-C-C-) "M"-superfamily conotoxin, Mo3964, shows it to have a β-sandwich structure that is stabilized by inter-sheet cross disulfide bonds. Mo3964 decreases outward K(+) currents in rat dorsal root ganglion neurons and increases the reversal potential of the NaV1.2 channels. The structure of Mo3964 (PDB ID: 2MW7 ) is constructed from the disulfide connectivity pattern, i.e., 1-3, 2-5, and 4-6, that is hitherto undescribed for the "M"-superfamily conotoxins. The tertiary structural fold has not been described for any of the known conus peptides. NOE (549), dihedral angle (84), and hydrogen bond (28) restraints, obtained by measurement of (h3)JNC' scalar couplings, were used as input for structure calculation. The ensemble of structures showed a backbone root mean square deviation of 0.68 ± 0.18 Å, with 87% and 13% of the backbone dihedral (ϕ, ψ) angles lying in the most favored and additional allowed regions of the Ramachandran map. The conotoxin Mo3964 represents a new bioactive peptide fold that is stabilized by disulfide bonds and adds to the existing repertoire of scaffolds that can be used to design stable bioactive peptide molecules.


  • Organizational Affiliation
    • Molecular Biophysics Unit, Indian Institute of Science, Bangalore-560012, India.

Macromolecule Content 

  • Total Structure Weight: 3.97 kDa 
  • Atom Count: 272 
  • Modeled Residue Count: 37 
  • Deposited Residue Count: 37 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Mo396437Conus monileMutation(s): 0 
UniProt
Find proteins for A0A0R4I952 (Conus monile)
Explore A0A0R4I952 
Go to UniProtKB:  A0A0R4I952
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A0R4I952
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with acceptable covalent geometry 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2015-09-23
    Type: Initial release
  • Version 1.1: 2015-10-21
    Changes: Structure summary
  • Version 1.2: 2023-06-14
    Changes: Data collection, Database references, Other
  • Version 1.3: 2024-10-16
    Changes: Data collection, Database references, Structure summary