2MVI | pdb_00002mvi

Structure of the S-glycosylated bacteriocin ASM1

• PDB DOI: https://doi.org/10.2210/pdb2MVI/pdb
• BMRB: 25269

• Classification: ANTIMICROBIAL PROTEIN
• Organism(s): Lactiplantibacillus plantarum
• Mutation(s): No 
• Membrane Protein: Yes  OPM


• Deposited: 2014-10-06 Released: 2014-12-10 
• Deposition Author(s): Goroncy, A.K., Loo, T.S., Koolard, A., Patchett, M.L., Norris, G.E.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Literature

Structural characterization of the S-glycosylated bacteriocin ASM1 from Lactobacillus plantarum

Goroncy, A.K., Loo, T.S., Koolard, A., Patchett, M.L., Norris, G.E.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 5.09 kDa 
• Atom Count: 350 
• Modeled Residue Count: 43 
• Deposited Residue Count: 43 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Bacteriocin plantarican ASM1	A	43	Lactiplantibacillus plantarum	Mutation(s): 0  Membrane Entity: Yes
UniProt
Find proteins for C7G1H4 (Lactiplantibacillus plantarum) Explore C7G1H4  Go to UniProtKB:  C7G1H4
Glycosylation
Glycosylation Sites: 2

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
NAG	B [auth A], C [auth A]	2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2014-12-10 
Deposition Author(s): Goroncy, A.K., Loo, T.S., Koolard, A., Patchett, M.L., Norris, G.E.

Revision History  

• Version 1.0: 2014-12-10
  Type: Initial release
  
• Version 1.1: 2020-07-29
  Type: Remediation
  Reason: Carbohydrate remediation
  Changes: Data collection, Derived calculations, Structure summary
• Version 1.2: 2023-06-14
  Changes: Database references, Other, Structure summary
• Version 1.3: 2024-11-06
  Changes: Data collection, Database references, Structure summary