2MLP | pdb_00002mlp

MICROCIN LEADER PEPTIDE FROM E. COLI, NMR, 25 STRUCTURES


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 30 
  • Conformers Submitted: 25 
  • Selection Criteria: RANDOM 

wwPDB Validation 3D Report Full Report

Validation slider image for 2MLP

This is version 1.6 of the entry. See complete history

Literature

Role of the microcin B17 propeptide in substrate recognition: solution structure and mutational analysis of McbA1-26.

Roy, R.S.Kim, S.Baleja, J.D.Walsh, C.T.

(1998) Chem Biol 5: 217-228

  • DOI: https://doi.org/10.1016/s1074-5521(98)90635-4
  • Primary Citation Related Structures: 
    2MLP

  • PubMed Abstract: 

    The peptide antibiotic microcin B17 (MccB17) contains oxazole and thiazole heterocycles formed by the post-translational modification of four cysteine and four serine residues. An amino-terminal propeptide targets the 69 amino acid precursor of MccB17 (preproMccB17) to the heterocyclization enzyme MccB17 synthetase. The mode of synthetase recognition has been unclear, because there has been limited structural information available on the MccB17 propeptide to date. The solution structure of the MccB17 propeptide (McbA1-26), determined using nuclear magnetic resonance, reveals that McbA1-26 is an amphipathic alpha helix. Mutational analysis of 13 propeptide residues showed that Phe8 and Leu12 are essential residues for MccB17 synthetase recognition. A domain of the propeptide was putatively identified as the region that interacts with the synthetase. MccB17 synthetase recognizes key hydrophobic residues within a helical propeptide, allowing the selective heterocyclization of downstream cysteine and serine residues in preproMccB17. The determination of the solution structure of the propeptide should facilitate the investigation of other functions of the propeptide, including a potential role in antibiotic secretion.


  • Organizational Affiliation
    • Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA.

Macromolecule Content 

  • Total Structure Weight: 2.78 kDa 
  • Atom Count: 194 
  • Modeled Residue Count: 27 
  • Deposited Residue Count: 27 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
MCBA PROPEPTIDE27Escherichia coliMutation(s): 0 
UniProt
Find proteins for P05834 (Escherichia coli)
Explore P05834 
Go to UniProtKB:  P05834
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP05834
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 30 
  • Conformers Submitted: 25 
  • Selection Criteria: RANDOM 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 1998-07-22
    Type: Initial release
  • Version 1.1: 2008-03-24
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2012-12-12
    Changes: Other
  • Version 1.4: 2013-03-13
    Changes: Other
  • Version 1.5: 2022-03-16
    Changes: Data collection, Database references, Derived calculations, Other
  • Version 1.6: 2024-10-23
    Changes: Data collection, Structure summary