2MF9

Solution structure of the N-terminal domain of human FKBP38 (FKBP38NTD)


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation 3D Report Full Report



Literature

Functional role of the flexible N-terminal extension of FKBP38 in catalysis.

Kang, C.Ye, H.Chia, J.Choi, B.H.Dhe-Paganon, S.Simon, B.Schutz, U.Sattler, M.Yoon, H.S.

(2013) Sci Rep 3: 2985-2985

  • DOI: 10.1038/srep02985
  • Primary Citation of Related Structures:  
    2MF9

  • PubMed Abstract: 
  • FKBP38 regulates apoptosis through unique interactions with multiple regulators including Bcl-2. Interestingly, the peptidylprolyl isomerase activity of FKBP38 is only detectable when it binds to calcium-saturated calmodulin (CaM/Ca(2+)). This, in tu ...

    FKBP38 regulates apoptosis through unique interactions with multiple regulators including Bcl-2. Interestingly, the peptidylprolyl isomerase activity of FKBP38 is only detectable when it binds to calcium-saturated calmodulin (CaM/Ca(2+)). This, in turn, permits the formation of a complex with Bcl-2. FKBP38 thereby provides an important link between isomerase activity and apoptotic pathways. Here, we show that the N-terminal extension (residues 1-32) preceding the catalytic domain of FKBP38 has an autoinhibitory activity. The core isomerase activity of FKBP38 is inhibited by transient interactions involving the flexible N-terminal extension that precedes the catalytic domain. Notably, CaM/Ca(2+) binds to this N-terminal extension and thereby releases the autoinhibitory contacts between the N-terminal extension and the catalytic domain, thus potentiating the isomerase activity of FKBP38. Our data demonstrate how CaM/Ca(2+) modulates the catalytic activity of FKBP38.


    Related Citations: 
    • Backbone 1H, 13C, and 15N resonance assignments of the N-terminal domain of FKBP38 (FKBP38NTD).
      Kang, C.B., Ye, H., Vivekanandan, S., Simon, B., Sattler, M., Yoon, H.S.
      (2006) J Biomol NMR 36 Suppl 1: 37

    Organizational Affiliation

    1] School of Biological Science, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551, Singapore [2] [3].



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Peptidyl-prolyl cis-trans isomerase FKBP8A157Homo sapiensMutation(s): 0 
Gene Names: FKBP8FKBP38
EC: 5.2.1.8
Find proteins for Q14318 (Homo sapiens)
Explore Q14318 
Go to UniProtKB:  Q14318
NIH Common Fund Data Resources
PHAROS  Q14318
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 
  • OLDERADO: 2MF9 Olderado

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-11-06
    Type: Initial release