2MBV | pdb_00002mbv

LMO4-LIM2 in complex with DEAF1 (404-418)

PDB DOI: https://doi.org/10.2210/pdb2MBV/pdb
BMRB: 19415

Classification: TRANSCRIPTION
Organism(s): Mus musculus
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2013-08-06 Released: 2014-08-20
Deposition Author(s): Joseph, S., Matthews, J.M., Kwan, A.H.-Y., Mackay, J.P., Cubeddu, L., Foo, P.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 50
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

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This is version 1.1 of the entry. See complete history.

Literature

Structural characterisation of LIM-only protein 4 (LMO4) in complex with Deformed Epidermal Autoregulatory Factor-1 (DEAF1)

Joseph, S., Kwan, A.H., Foo, P., Cubeddu, L., Mackay, J.P., Matthews, J.M.

To be published.

Macromolecule Content

Total Structure Weight: 10.27 kDa
Atom Count: 711
Modeled Residue Count: 96
Deposited Residue Count: 96
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Fusion protein of LIM domain transcription factor LMO4 (77-147) and DEAF1 (404-418)	A	96	Mus musculus	Mutation(s): 0 Gene Names: Lmo4
UniProt
Find proteins for P61969 (Mus musculus) Explore P61969 Go to UniProtKB: P61969
Find proteins for Q9Z1T5 (Mus musculus) Explore Q9Z1T5 Go to UniProtKB: Q9Z1T5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Groups	P61969 Q9Z1T5
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ZN Query on ZN Download:Ideal Coordinates CCD File SDF format, chain C [auth A] SDF format, chain B [auth A] MOL2 format, chain C [auth A] MOL2 format, chain B [auth A] mmCIF format, chain C [auth A] mmCIF format, chain B [auth A]	B [auth A], C [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain B [auth A] Focus chain C [auth A]

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 50
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

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View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2014-08-20

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2014-08-20
Type: Initial release
Version 1.1: 2024-05-01
Changes: Data collection, Database references, Derived calculations

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.