2LVR

Solution structure of Miz-1 zinc finger 8

PDB DOI: https://doi.org/10.2210/pdb2LVR/pdb
BMRB: 18586

Classification: TRANSCRIPTION
Organism(s): Homo sapiens
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2012-07-10 Released: 2012-07-25
Deposition Author(s): Bedard, M., Maltais, L., Beaulieu, M., Bernard, D., Lavigne, P.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 300
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

This is version 1.5 of the entry. See complete history.

Literature

NMR structure note: solution structure of human Miz-1 zinc fingers 8 to 10.

Bedard, M., Maltais, L., Beaulieu, M.E., Bilodeau, J., Bernard, D., Lavigne, P.

(2012) J Biomol NMR 54: 317-323

PubMed: 22986688 Search on PubMed
DOI: https://doi.org/10.1007/s10858-012-9670-1
Primary Citation of Related Structures:
2LVR, 2LVT, 2LVU

Organizational Affiliation

Institut de Pharmacologie de Sherbrooke, Faculté de Médecine et des Sciences de la Santé, Université de Sherbrooke, 3001 12e Avenue Nord, Campus de la santé, Sherbrooke, QC, J1H 5N4, Canada.

Macromolecule Content

Total Structure Weight: 9.58 kDa
Atom Count: 246
Modelled Residue Count: 30
Deposited Residue Count: 83
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Zinc finger and BTB domain-containing protein 17	A	83	Homo sapiens	Mutation(s): 0 Gene Names: MIZ1, ZBTB17, ZHX1, ZNF151, ZNF60
UniProt & NIH Common Fund Data Resources
Find proteins for Q13105 (Homo sapiens) Explore Q13105 Go to UniProtKB: Q13105
PHAROS: Q13105 GTEx: ENSG00000116809
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q13105
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ZN Query on ZN Download Ideal Coordinates CCD File SDF format, chain B [auth A] MOL2 format, chain B [auth A] mmCIF format, chain B [auth A]	B [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain B [auth A]

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 300
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2012-07-25

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2012-07-25
Type: Initial release
Version 1.1: 2012-10-03
Changes: Database references
Version 1.2: 2012-11-14
Changes: Database references
Version 1.3: 2016-04-27
Changes: Structure summary
Version 1.4: 2023-06-14
Changes: Data collection, Database references, Derived calculations, Other
Version 1.5: 2024-05-15
Changes: Data collection, Database references