2LTN

DESIGN, EXPRESSION, AND CRYSTALLIZATION OF RECOMBINANT LECTIN FROM THE GARDEN PEA (PISUM SATIVUM)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.70 Å
  • R-Value Observed: 0.177 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Design, expression, and crystallization of recombinant lectin from the garden pea (Pisum sativum).

Prasthofer, T.Phillips, S.R.Suddath, F.L.Engler, J.A.

(1989) J Biol Chem 264: 6793-6796

  • Primary Citation of Related Structures:  
    2LTN

  • PubMed Abstract: 
  • The propeptide form of the lectin from the garden pea (Pisum sativum agglutinin) has been expressed in Escherichia coli by attaching its cDNA to an inducible promoter. By a number of criteria, including the ability to form dimers, hemagglutination titer, Western blot, and enzyme-linked immunosorbent assay, the resulting propeptide molecule is virtually indistinguishable from the mature proteolytically processed lectin isolated from peas ...

    The propeptide form of the lectin from the garden pea (Pisum sativum agglutinin) has been expressed in Escherichia coli by attaching its cDNA to an inducible promoter. By a number of criteria, including the ability to form dimers, hemagglutination titer, Western blot, and enzyme-linked immunosorbent assay, the resulting propeptide molecule is virtually indistinguishable from the mature proteolytically processed lectin isolated from peas. Preliminary crystallization experiments using the recombinant propeptide lectin yield crystals in space group P2(1)2(1)2(1) with a = 64.8 A, b = 73.8 A, and c = 109.0 A (1 A = 0.1 nm) that diffract to 2.8-A resolution. This unit cell size is quite similar to the unit cell determined for native pea lectin, suggesting that the overall structure of the recombinant prolectin is virtually identical.


    Related Citations: 
    • The Crystal Structure of Pea Lectin at 3.0-Angstroms Resolution
      Einspahr, H., Parks, E.H., Suguna, K., Subramanian, E., Suddath, F.L.
      (1986) J Biol Chem 261: 16518
    • The Location of Manganese and Calcium Ion Cofactors in Pea Lectin Crystals by Use of Anomalous Dispersion and Tuneable Synchrotron X-Radiation
      Einspahr, H., Suguna, K., Suddath, F.L., Ellis, G., Helliwell, J.R., Papiz, M.Z.
      (1985) Acta Crystallogr B 41: 336
    • The Crystal Structure of Pea Lectin at 6-Angstroms Resolution
      Meehanjunior, E.J., Mcduffie, J., Einspahr, H., Bugg, C.E., Suddath, F.L.
      (1982) J Biol Chem 257: 13278

    Organizational Affiliation

    Department of Biochemistry, School of Medicine, University of Alabama, Birmingham 35294.



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
PEA LECTIN, ALPHA CHAINA, C181Pisum sativumMutation(s): 0 
Gene Names: LECAPSL1
UniProt
Find proteins for P02867 (Pisum sativum)
Explore P02867 
Go to UniProtKB:  P02867
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP02867
Protein Feature View
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
PEA LECTIN, BETA CHAINB, D52Pisum sativumMutation(s): 0 
Gene Names: LECAPSL1
UniProt
Find proteins for P02867 (Pisum sativum)
Explore P02867 
Go to UniProtKB:  P02867
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP02867
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MN
Query on MN

Download Ideal Coordinates CCD File 
E [auth A],
G [auth C]
MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
 Ligand Interaction
CA
Query on CA

Download Ideal Coordinates CCD File 
F [auth A],
H [auth C]
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.70 Å
  • R-Value Observed: 0.177 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 50.73α = 90
b = 61.16β = 90
c = 136.59γ = 90
Software Package:
Software NamePurpose
PROLSQrefinement

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 1990-07-15
    Type: Initial release
  • Version 1.1: 2008-03-24
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Derived calculations, Version format compliance