2LN8

The solution structure of theromacin


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 10 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Macin family of antimicrobial proteins combines antimicrobial and nerve repair activities.

Jung, S.Sonnichsen, F.D.Hung, C.W.Tholey, A.Boidin-Wichlacz, C.Haeusgen, W.Gelhaus, C.Desel, C.Podschun, R.Waetzig, V.Tasiemski, A.Leippe, M.Grotzinger, J.

(2012) J Biol Chem 287: 14246-14258

  • DOI: https://doi.org/10.1074/jbc.M111.336495
  • Primary Citation of Related Structures:  
    2LN8

  • PubMed Abstract: 

    The tertiary structures of theromacin and neuromacin confirmed the macin protein family as a self-contained family of antimicrobial proteins within the superfamily of scorpion toxin-like proteins. The macins, which also comprise hydramacin-1, are antimicrobially active against Gram-positive and Gram-negative bacteria. Despite high sequence identity, the three proteins showed distinct differences with respect to their biological activity. Neuromacin exhibited a significantly stronger capacity to permeabilize the cytoplasmic membrane of Bacillus megaterium than theromacin and hydramacin-1. Accordingly, it is the only macin that displays pore-forming activity and that was potently active against Staphylococcus aureus. Moreover, neuromacin and hydramacin-1 led to an aggregation of bacterial cells that was not observed with theromacin. Analysis of the molecular surface properties of macins allowed confirmation of the barnacle model as the mechanistic model for the aggregation effect. Besides being antimicrobially active, neuromacin and theromacin, in contrast to hydramacin-1, were able to enhance the repair of leech nerves ex vivo. Notably, all three macins enhanced the viability of murine neuroblastoma cells, extending their functional characteristics. As neuromacin appears to be both a functional and structural chimera of hydramacin-1 and theromacin, the putative structural correlate responsible for the nerve repair capacity in leech was located to a cluster of six amino acid residues using the sequence similarity of surface-exposed regions.


  • Organizational Affiliation

    Institute of Biochemistry, Zoophysiology, Christian Albrechts University of Kiel, Olshausenstrasse 40, 24098 Kiel, Germany.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Theromacin75Hirudo medicinalisMutation(s): 0 
UniProt
Find proteins for A8I0L8 (Hirudo medicinalis)
Explore A8I0L8 
Go to UniProtKB:  A8I0L8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA8I0L8
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 10 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

View Full Validation Report



Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2012-03-14
    Type: Initial release
  • Version 1.1: 2012-05-09
    Changes: Database references
  • Version 1.2: 2015-08-19
    Changes: Structure summary
  • Version 1.3: 2023-06-14
    Changes: Data collection, Database references, Other