Macromolecule Content

Total Structure Weight: 44.03 kDa
Atom Count: 2811
Modelled Residue Count: 355
Deposited Residue Count: 395
Unique protein chains: 1

2LBU

HADDOCK calculated model of Congo red bound to the HET-s amyloid

DOI: 10.2210/pdb2LBU/pdb

Classification: PROTEIN FIBRIL
Organism(s): Podospora anserina
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2011-04-07 Released: 2011-06-01
Deposition Author(s): Schutz, A.K., Soragni, A., Hornemann, S., Aguzzi, A., Ernst, M., Bockmann, A., Meier, B.H.

Experimental Data Snapshot

Method: SOLID-STATE NMR
Conformers Calculated: 200
Conformers Submitted: 4
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

The Amyloid-Congo Red Interface at Atomic Resolution.

Schutz, A.K., Soragni, A., Hornemann, S., Aguzzi, A., Ernst, M., Bockmann, A., Meier, B.H.

(2011) Angew Chem Int Ed Engl

PubMed: 21591034 Search on PubMed
DOI: 10.1002/anie.201008276
Primary Citation of Related Structures:
2LBU

Macromolecules

Find similar proteins by:

(by identity cutoff) | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Small s protein	A, B, C, D, E	79	Podospora anserina	Mutation(s): 0 Gene Names: het-s, small s
Find proteins for Q03689 (Podospora anserina) Explore Q03689 Go to UniProtKB: Q03689
Protein Feature View Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
CGO Query on CGO Download Ideal Coordinates CCD File SDF format, chain F [auth B] MOL2 format, chain F [auth B]	F [auth B]	sodium 3,3'-(1E,1'E)-biphenyl-4,4'-diylbis(diazene-2,1-diyl)bis(4-aminonaphthalene-1-sulfonate) C₃₂ H₂₂ N₆ Na₂ O₆ S₂ IQFVPQOLBLOTPF-HKXUKFGYSA-L		Ligand Interaction

Experimental Data & Validation

Experimental Data

Method: SOLID-STATE NMR
Conformers Calculated: 200
Conformers Submitted: 4
Selection Criteria: structures with the lowest energy
OLDERADO: 2LBU Olderado

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Deposited Date: 2011-04-07
Released Date: 2011-06-01

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2011-06-01
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.