2L80

Solution Structure of the Zinc Finger Domain of USP13

• PDB DOI: https://doi.org/10.2210/pdb2L80/pdb
• BMRB: 17388

• Classification: PROTEIN BINDING
• Organism(s): Homo sapiens
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2010-12-28 Released: 2011-12-14 
• Deposition Author(s): Zhang, Y., Zhou, C., Zhou, Z., Song, A., Hu, H.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 10 
• Selection Criteria: structures with the lowest energy 

Literature

Biochemical Characterization of the Ubiquitin Receptors in USP13 Reveals Different Catalytic Activation of Deubiquitination from Its Analogue USP5

Zhang, Y., Song, A., Zhou, C., Zhou, Z., Hu, H.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 12.91 kDa 
• Atom Count: 894 
• Modelled Residue Count: 114 
• Deposited Residue Count: 116 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Ubiquitin carboxyl-terminal hydrolase 13	A	116	Homo sapiens	Mutation(s): 0  Gene Names: USP13
UniProt & NIH Common Fund Data Resources
Find proteins for Q92995 (Homo sapiens) Explore Q92995  Go to UniProtKB:  Q92995
PHAROS:  Q92995 GTEx:  ENSG00000058056

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN	B [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 10 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2011-12-14 
Deposition Author(s): Zhang, Y., Zhou, C., Zhou, Z., Song, A., Hu, H.

Revision History  

• Version 1.0: 2011-12-14
  Type: Initial release
  
• Version 1.1: 2023-06-14
  Changes: Data collection, Database references, Derived calculations, Other
• Version 1.2: 2024-05-15
  Changes: Data collection, Database references