2L4M

Solution structure of the Zbeta domain of human DAI and its binding modes to B- and Z-DNA

PDB DOI: https://doi.org/10.2210/pdb2L4M/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2010-10-08 Released: 2011-04-13
Deposition Author(s): Kim, K., Khayrutdinov, B.I., Jeon, Y.H., Kim, K.K.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Solution structure of the Zbeta domain of human DNA-dependent activator of IFN-regulatory factors and its binding modes to B- and Z-DNA

Kim, K., Khayrutdinov, B., Lee, C.-K., Cheong, H.-K., Kang, S., Park, H., Lee, S., Kim, Y.-G., Jee, J.-G., Rich, A., Kim, K.K., Jeon, Y.H.

(2011) Proc Natl Acad Sci U S A

Macromolecule Content

Total Structure Weight: 8.23 kDa
Atom Count: 576
Modelled Residue Count: 69
Deposited Residue Count: 69
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein	A	69	Homo sapiens	Mutation(s): 0 Gene Names: ZBP1
UniProt & NIH Common Fund Data Resources
Find proteins for Q9H171 (Homo sapiens) Explore Q9H171 Go to UniProtKB: Q9H171
PHAROS: Q9H171 GTEx: ENSG00000124256
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9H171
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2011-04-13

Deposition Author(s):

Khayrutdinov, B.I.

Revision History (Full details and data files)

Version 1.0: 2011-04-13
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2024-05-01
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.