2L4M | pdb_00002l4m

Solution structure of the Zbeta domain of human DAI and its binding modes to B- and Z-DNA

PDB DOI: https://doi.org/10.2210/pdb2L4M/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2010-10-08 Released: 2011-04-13
Deposition Author(s): Kim, K., Khayrutdinov, B.I., Jeon, Y.H., Kim, K.K.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 2L4M

This is version 1.2 of the entry. See complete history.

Literature

Solution structure of the Zbeta domain of human DNA-dependent activator of IFN-regulatory factors and its binding modes to B- and Z-DNA

Kim, K., Khayrutdinov, B., Lee, C.-K., Cheong, H.-K., Kang, S., Park, H., Lee, S., Kim, Y.-G., Jee, J.-G., Rich, A., Kim, K.K., Jeon, Y.H.

(2011) Proc Natl Acad Sci U S A

Macromolecule Content

Total Structure Weight: 8.23 kDa
Atom Count: 576
Modeled Residue Count: 69
Deposited Residue Count: 69
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein	A	69	Homo sapiens	Mutation(s): 0 Gene Names: ZBP1
UniProt & NIH Common Fund Data Resources
Find proteins for Q9H171 (Homo sapiens) Explore Q9H171 Go to UniProtKB: Q9H171
PHAROS: Q9H171 GTEx: ENSG00000124256
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9H171
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2011-04-13

Deposition Author(s):

Khayrutdinov, B.I.

Revision History (Full details and data files)

Version 1.0: 2011-04-13
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2024-05-01
Changes: Data collection, Database references

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.