2KZY | pdb_00002kzy

Solution NMR structure of the ZNF216 A20 zinc finger

PDB DOI: https://doi.org/10.2210/pdb2KZY/pdb
BMRB: 17023

Classification: METAL BINDING PROTEIN
Organism(s): Rattus norvegicus
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2010-06-28 Released: 2011-07-06
Deposition Author(s): Garner, T.P., Long, J.E., Searle, M.S., Layfield, R.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations

wwPDB Validation 3D Report Full Report

Validation slider image for 2KZY

This is version 1.2 of the entry. See complete history.

Literature

Co-localisation of ubiquitin receptors ZNF216 and p62 in a ubiquitin-mediated ternary complex

Garner, T.P., Strachan, J., Long, J.E., Layfield, R., Searle, M.S.

To be published.

Macromolecule Content

Total Structure Weight: 6.6 kDa
Atom Count: 450
Modeled Residue Count: 62
Deposited Residue Count: 62
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Zfand5 protein (Zinc finger protein 216 (Predicted), isoform CRA_a)	A	62	Rattus norvegicus	Mutation(s): 0 Gene Names: Zfand5
UniProt
Find proteins for B5DF11 (Rattus norvegicus) Explore B5DF11 Go to UniProtKB: B5DF11
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	B5DF11
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ZN Query on ZN Download:Ideal Coordinates CCD File SDF format, chain B [auth A] MOL2 format, chain B [auth A] mmCIF format, chain B [auth A]	B [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain B [auth A]

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations

Structure Validation

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View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2011-07-06

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2011-07-06
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2024-05-01
Changes: Data collection, Database references, Derived calculations

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.