2KKK | pdb_00002kkk

An i-motif structure with intercalated T T pairs

  • Classification: DNA
  • Mutation(s): No 

  • Deposited: 2009-06-25 Released: 2009-08-04 
  • Deposition Author(s): Leroy, J., Canalia, M.

Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 10 
  • Conformers Submitted: 10 
  • Selection Criteria: all calculated structures submitted 

wwPDB Validation 3D Report Full Report

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This is version 1.3 of the entry. See complete history. 

Literature

[5mCCTCTCTCC]4: an i-motif tetramer with intercalated T T pairs.

Leroy, J., Canalia, M.

To be published.

Macromolecule Content 

  • Total Structure Weight: 10.15 kDa 
  • Atom Count: 688 
  • Modeled Residue Count: 36 
  • Deposited Residue Count: 36 
  • Unique nucleic acid chains: 1

Macromolecules

Find similar nucleic acids by:  Sequence
Entity ID: 1
MoleculeChains LengthOrganismImage
5'-D(*(MCY)P*CP*TP*CP*TP*CP*TP*CP*C)-3'
A, B, C, D
9N/A
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 10 
  • Conformers Submitted: 10 
  • Selection Criteria: all calculated structures submitted 

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2009-08-04
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2022-03-16
    Changes: Database references, Derived calculations
  • Version 1.3: 2024-05-29
    Changes: Data collection