2KDK | pdb_00002kdk

Structure of human circadian clock protein BMAL2 C-terminal PAS domain

PDB DOI: https://doi.org/10.2210/pdb2KDK/pdb

Classification: TRANSCRIPTION REGULATOR
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): Yes

Deposited: 2009-01-10 Released: 2011-04-13
Deposition Author(s): Wasielewski, E., Correia, C., Prendergast, F.G., Mer, G.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 10
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 2KDK

This is version 1.4 of the entry. See complete history.

Literature

Structure of human circadian clock protein BMAL2 C-terminal PAS domain

Correia, C., Wasielewski, E., Prendergast, F.G., Mer, G.

To be published.

Macromolecule Content

Total Structure Weight: 13.87 kDa
Atom Count: 958
Modeled Residue Count: 118
Deposited Residue Count: 121
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Aryl hydrocarbon receptor nuclear translocator-like protein 2	A	121	Homo sapiens	Mutation(s): 1 Gene Names: ARNTL2, BMAL2, CLIF, MOP9
UniProt & NIH Common Fund Data Resources
Find proteins for Q8WYA1 (Homo sapiens) Explore Q8WYA1 Go to UniProtKB: Q8WYA1
PHAROS: Q8WYA1 GTEx: ENSG00000029153
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q8WYA1
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 10
Selection Criteria: structures with the lowest energy

Structure Validation

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View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2011-04-13

Deposition Author(s):

Wasielewski, E.

Prendergast, F.G.

Revision History (Full details and data files)

Version 1.0: 2011-04-13
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2011-10-26
Changes: Structure summary
Version 1.3: 2021-10-20
Changes: Data collection, Database references
Version 1.4: 2024-05-22
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.