2KDD | pdb_00002kdd

Solution structure of the conserved C-terminal dimerization domain of Borealin


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 10 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation 3D Report Full Report

Validation slider image for 2KDD

This is version 1.4 of the entry. See complete history

Literature

Phosphorylation of a borealin dimerization domain is required for proper chromosome segregation.

Bourhis, E.Lingel, A.Phung, Q.Fairbrother, W.J.Cochran, A.G.

(2009) Biochemistry 48: 6783-6793

  • DOI: https://doi.org/10.1021/bi900530v
  • Primary Citation Related Structures: 
    2KDD

  • PubMed Abstract: 

    The chromosomal passenger complex (CPC) has been identified as a master regulator of mitosis. In particular, proper chromosome segregation and cytokinesis depend on the correct localization and function of the CPC. Within the complex, the kinase Aurora B associates with Incenp, Survivin, and Borealin. The stoichiometry of the complex as well as a complete understanding of how these four components interact with each other remains to be elucidated. Here, we identify a new domain of Borealin. We determined its structure using NMR spectroscopy and discovered a novel dimerization motif. Interestingly, we found that substitutions at Borealin T230, recently identified as an Mps1 phosphorylation site, can modulate the dimerization state of Borealin. Mutation of this single residue to alanine or valine impairs Aurora B activity during mitosis and causes chromosome segregation defects. This study reveals that Mps1 regulates the CPC through a novel Borealin domain.


  • Organizational Affiliation
    • Department of Protein Engineering, Genentech, Inc., 1 DNA Way, South San Francisco,California 94080, USA.

Macromolecule Content 

  • Total Structure Weight: 16.16 kDa 
  • Atom Count: 872 
  • Modeled Residue Count: 114 
  • Deposited Residue Count: 152 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Borealin
A, B
76Homo sapiensMutation(s): 0 
Gene Names: CDCA8PESCRG3
UniProt & NIH Common Fund Data Resources
Find proteins for Q53HL2 (Homo sapiens)
Explore Q53HL2 
Go to UniProtKB:  Q53HL2
PHAROS:  Q53HL2
GTEx:  ENSG00000134690 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ53HL2
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 10 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2009-06-30
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2020-02-19
    Changes: Data collection, Database references, Derived calculations, Other
  • Version 1.3: 2023-06-14
    Changes: Database references, Other
  • Version 1.4: 2024-05-08
    Changes: Data collection, Database references