2KAW

NMR structure of the mDvl1 PDZ domain in complex with its inhibitor


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 2000 
  • Conformers Submitted: 20 
  • Selection Criteria: LOWEST ENERGY CONFORMATION 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Sulindac inhibits canonical Wnt signaling by blocking the PDZ domain of the protein Dishevelled.

Lee, H.J.Wang, N.X.Shi, D.L.Zheng, J.J.

(2009) Angew Chem Int Ed Engl 48: 6448-6452


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Segment polarity protein dishevelled homolog DVL-1A90Mus musculusMutation(s): 0 
Gene Names: Dvl1Dvl
UniProt
Find proteins for P51141 (Mus musculus)
Explore P51141 
Go to UniProtKB:  P51141
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP51141
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SUZ
Query on SUZ

Download Ideal Coordinates CCD File 
B [auth A][(1Z)-5-fluoro-2-methyl-1-{4-[methylsulfinyl]benzylidene}-1H-inden-3-yl]acetic acid
C20 H17 F O3 S
MLKXDPUZXIRXEP-LQVWSKNFSA-N
 Ligand Interaction
Binding Affinity Annotations 
IDSourceBinding Affinity
SUZ PDBBind:  2KAW Ki: 1.07e+4 (nM) from 1 assay(s)
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 2000 
  • Conformers Submitted: 20 
  • Selection Criteria: LOWEST ENERGY CONFORMATION 
  • OLDERADO: 2KAW Olderado

Structure Validation

View Full Validation Report




Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2009-09-15
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Non-polymer description, Version format compliance