2KAM | pdb_00002kam

NMR structure of delta-toxin from Staphylococcus aureus in CD3OH

• PDB DOI: https://doi.org/10.2210/pdb2KAM/pdb
• BMRB: 16028

• Classification: TOXIN
• Organism(s): Staphylococcus aureus
• Mutation(s): No 


• Deposited: 2008-11-11 Released: 2009-05-12 
• Deposition Author(s): Loureiro-Ferreira, N., Rodrigues, J., Brito, R.M.M.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Literature

NMR solution structure of delta-toxin in membrane-mimetic environments

Loureiro-Ferreira, N., Rodrigues, J., Birkbeck, T.H., Brito, R.M.M.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 3.01 kDa 
• Atom Count: 211 
• Modeled Residue Count: 26 
• Deposited Residue Count: 26 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Delta-hemolysin	A	26	Staphylococcus aureus	Mutation(s): 0
UniProt
Find proteins for P0C1V1 (Staphylococcus aureus) Explore P0C1V1  Go to UniProtKB:  P0C1V1

Small Molecules

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
FME	A	L-PEPTIDE LINKING	C6 H11 N O3 S		MET

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2009-05-12 
Deposition Author(s): Loureiro-Ferreira, N., Rodrigues, J., Brito, R.M.M.

Revision History  

• Version 1.0: 2009-05-12
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2022-03-16
  Changes: Data collection, Database references, Derived calculations
• Version 1.3: 2024-10-30
  Changes: Data collection, Structure summary