2K5P | pdb_00002k5p

NMR Solution Structure of a Thiamine Biosynthesis Protein from Geobacter Metallireducens: Northeast Structural Genomics Consortium Target GmR137

PDB DOI: https://doi.org/10.2210/pdb2K5P/pdb
BMRB: 15844

Classification: BIOSYNTHETIC PROTEIN
Organism(s): Geobacter metallireducens GS-15
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2008-06-30 Released: 2008-08-26
Deposition Author(s): Mani, R., Wang, H., Jiang, M., Magliaqui, M., Xiao, R., Nair, R., Baran, M.C., Gurla, S.V.T., Acton, T.B., Rost, B., Montelione, G.T., Northeast Structural Genomics Consortium (NESG)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 140
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 2K5P

This is version 1.4 of the entry. See complete history.

Literature

NMR Solution Structure of a Thiamine Biosynthesis Protein from Geobacter Metallireducens: Northeast Structural Genomics Consortium Target GmR137

Mani, R., Wang, H., Jiang, M., Magliaqui, M., Xiao, R., Nair, R., Baran, M.C., Gurla, S.V.T., Acton, T.B., Rost, B., Montelione, G.T.

To be published.

Macromolecule Content

Total Structure Weight: 8.53 kDa
Atom Count: 600
Modeled Residue Count: 78
Deposited Residue Count: 78
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
thiamine-biosynthesis protein	A	78	Geobacter metallireducens GS-15	Mutation(s): 0 Gene Names: Gmet_1567
UniProt
Find proteins for Q39VC5 (Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15)) Explore Q39VC5 Go to UniProtKB: Q39VC5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q39VC5
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 140
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2008-08-26

Deposition Author(s):

Montelione, G.T.

Northeast Structural Genomics Consortium (NESG)

Revision History (Full details and data files)

Version 1.0: 2008-08-26
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2020-02-19
Changes: Data collection, Database references, Derived calculations, Other
Version 1.3: 2023-06-14
Changes: Database references, Other
Version 1.4: 2024-05-08
Changes: Data collection, Database references

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.