2K1D

NMR Studies of a Pathogenic Mutant (D178N) of the Human Prion Protein

• PDB DOI: https://doi.org/10.2210/pdb2K1D/pdb
• BMRB: 15676

• Classification: UNKNOWN FUNCTION
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): Yes 


• Deposited: 2008-02-29 Released: 2009-03-03 
• Deposition Author(s): Mills, J.L., Surewicz, K., Surewicz, W.K., Sonnichsen, F.D.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations 

Literature

Residue 129 polymorphism and conformational dynamics of familial prion diseases associated with the human prion protein variant D178N

Mills, J.L., Surewicz, K., Surewicz, W.K., Sonnichsen, F.D.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 16.49 kDa 
• Atom Count: 892 
• Modelled Residue Count: 107 
• Deposited Residue Count: 146 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Major prion protein	A	146	Homo sapiens	Mutation(s): 2  Gene Names: PRNP, PRIP, PRP
UniProt & NIH Common Fund Data Resources
Find proteins for P04156 (Homo sapiens) Explore P04156  Go to UniProtKB:  P04156
PHAROS:  P04156 GTEx:  ENSG00000171867

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2009-03-03 
Deposition Author(s): Mills, J.L., Surewicz, K., Surewicz, W.K., Sonnichsen, F.D.

Revision History  

• Version 1.0: 2009-03-03
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2015-07-22
  Changes: Database references
• Version 1.3: 2020-02-19
  Changes: Database references, Other
• Version 1.4: 2021-10-20
  Changes: Database references
• Version 1.5: 2023-06-14
  Changes: Other
• Version 1.6: 2024-05-08
  Changes: Data collection, Database references