2JN0 | pdb_00002jn0

Solution NMR structure of the ygdR protein from Escherichia coli. Northeast Structural Genomics target ER382A.

• PDB DOI: https://doi.org/10.2210/pdb2JN0/pdb
• BMRB: 15079

• Classification: MEMBRANE PROTEIN
• Organism(s): Escherichia coli
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2006-12-15 Released: 2007-05-01 
• Deposition Author(s): Rossi, P., Chen, C.X., Jiang, M., Cunningham, K., Ma, L., Xiao, R., Liu, J.C., Baran, M., Swapna, G.V.T., Acton, T.B., Rost, B., Montelione, G.T., Northeast Structural Genomics Consortium (NESG)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Literature

Solution NMR structure of the ygdR protein from Escherichia coli. Northeast Structural Genomics target ER382A.

Rossi, P., Chen, C.X., Jiang, M., Cunningham, K., Ma, L., Xiao, R., Liu, J., Baran, M.C., Swapna, G.V.T., Acton, T.B., Rost, B., Montelione, G.T.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 7.05 kDa 
• Atom Count: 394 
• Modeled Residue Count: 50 
• Deposited Residue Count: 61 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Hypothetical lipoprotein ygdR	A	61	Escherichia coli	Mutation(s): 0  Gene Names: ygdR
UniProt
Find proteins for P65294 (Escherichia coli (strain K12)) Explore P65294  Go to UniProtKB:  P65294

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2007-05-01 
Deposition Author(s): Rossi, P., Chen, C.X., Jiang, M., Cunningham, K., Ma, L., Xiao, R., Liu, J.C., Baran, M., Swapna, G.V.T., Acton, T.B., Rost, B., Montelione, G.T., Northeast Structural Genomics Consortium (NESG)

Revision History  

• Version 1.0: 2007-05-01
  Type: Initial release
  
• Version 1.1: 2008-05-01
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2020-02-05
  Changes: Data collection, Database references, Derived calculations, Experimental preparation, Other
• Version 1.4: 2023-06-14
  Changes: Data collection, Database references, Other
• Version 1.5: 2023-12-20
  Changes: Data collection, Other
• Version 1.6: 2024-05-08
  Changes: Database references