2JIN

Crystal structure of PDZ domain of Synaptojanin-2 binding protein


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.220 
  • R-Value Work: 0.166 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal Structure of Pdz Domain of Synaptojanin-2 Binding Protein

Tickle, J.Phillips, C.Pike, A.C.W.Cooper, C.Salah, E.Elkins, J.Turnbull, A.P.Edwards, A.Arrowsmith, C.H.Weigelt, J.Sundstrom, M.Doyle, D.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
SYNAPTOJANIN-2 BINDING PROTEIN
A
102Homo sapiensGene Names: SYNJ2BP (OMP25)
Find proteins for P57105 (Homo sapiens)
Go to Gene View: SYNJ2BP
Go to UniProtKB:  P57105
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NA
Query on NA

Download SDF File 
Download CCD File 
A
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
SO4
Query on SO4

Download SDF File 
Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.220 
  • R-Value Work: 0.166 
  • Space Group: I 4
Unit Cell:
Length (Å)Angle (°)
a = 65.993α = 90.00
b = 65.993β = 90.00
c = 41.384γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
PHASERphasing
SCALAdata scaling
MOSFLMdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2007-07-10
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Version format compliance