2J14

3,4,5-Trisubstituted Isoxazoles as Novel PPARdelta Agonists: Part2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.284 
  • R-Value Work: 0.224 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

3,4,5-Trisubstituted Isoxazoles as Novel Ppardelta Agonists. Part 2

Epple, R.Azimioara, M.Russo, R.Xie, Y.Wang, X.Cow, C.Wityak, J.Karanewsky, D.Bursulaya, B.Kreusch, A.Tuntland, T.Gerken, A.Iskandar, M.Saez, E.Seidel, H.M.Tian, S.S.

(2006) Bioorg.Med.Chem.Lett. 16: 5488

  • DOI: 10.1016/j.bmcl.2006.08.052

  • PubMed Abstract: 
  • A series of PPARdelta-selective agonists was investigated and optimized for a favorable in vivo pharmacokinetic profile. Isoxazole LCI765 (17d) was found to be a potent and selective PPARdelta agonist with good in vivo PK properties in mouse (C(max)= ...

    A series of PPARdelta-selective agonists was investigated and optimized for a favorable in vivo pharmacokinetic profile. Isoxazole LCI765 (17d) was found to be a potent and selective PPARdelta agonist with good in vivo PK properties in mouse (C(max)=5.1 microM, t(1/2)=3.1 h). LCI765 regulated expression of genes involved in energy homeostasis in relevant tissues when dosed orally in C57BL6 mice. A co-crystal structure of compound LCI765 and the LBD of PPARdelta is discussed.


    Organizational Affiliation

    Department of Medicinal Chemistry, The Genomics Institute of the Novartis Research Foundation, 10675 John Jay Hopkins Drive, San Diego, CA 92121, USA. repple@gnf.org




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR DELTA
A, B
285Homo sapiensMutation(s): 0 
Gene Names: PPARD (NR1C2, PPARB)
Find proteins for Q03181 (Homo sapiens)
Go to Gene View: PPARD
Go to UniProtKB:  Q03181
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GNI
Query on GNI

Download SDF File 
Download CCD File 
A, B
(3-{4-[2-(2,4-DICHLORO-PHENOXY)-ETHYLCARBAMOYL]-5-PHENYL-ISOXAZOL-3-YL}-PHENYL)-ACETIC ACID
C26 H20 Cl2 N2 O5
HINPKGVWVQYESB-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.284 
  • R-Value Work: 0.224 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 39.376α = 90.00
b = 93.390β = 90.00
c = 92.258γ = 90.00
Software Package:
Software NamePurpose
DENZOdata reduction
MOLREPphasing
SCALEPACKdata scaling
CNSrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2006-09-06
    Type: Initial release
  • Version 1.1: 2011-05-08
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance