2J0A

Structure of the catalytic domain of mouse Manic Fringe


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.194 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Structural Insights Into the Notch-Modifying Glycosyltransferase Fringe

Jinek, M.Chen, Y.-W.Clausen, H.Cohen, S.M.Conti, E.

(2006) Nat.Struct.Mol.Biol. 13: 945

  • DOI: 10.1038/nsmb1144
  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • Fringe proteins are beta1,3-N-acetylglucosaminyltransferases that modify Notch receptors, altering their ligand-binding specificity to regulate Notch signaling in development. We present the crystal structure of mouse Manic Fringe bound to UDP and ma ...

    Fringe proteins are beta1,3-N-acetylglucosaminyltransferases that modify Notch receptors, altering their ligand-binding specificity to regulate Notch signaling in development. We present the crystal structure of mouse Manic Fringe bound to UDP and manganese. The structure reveals amino acid residues involved in recognition of donor substrates and catalysis, and a putative binding pocket for acceptor substrates. Mutations of several invariant residues in this pocket impair Fringe activity in vivo.


    Organizational Affiliation

    European Molecular Biology Laboratory, Meyerhofstrasse 1, D-69117 Heidelberg, Germany.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE MANIC FRINGE
A
280Mus musculusMutation(s): 1 
Gene Names: Mfng
EC: 2.4.1.222
Find proteins for O09008 (Mus musculus)
Go to UniProtKB:  O09008
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
K
Query on K

Download SDF File 
Download CCD File 
A
POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
 Ligand Interaction
SO4
Query on SO4

Download SDF File 
Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.194 
  • Space Group: P 21 21 2
Unit Cell:
Length (Å)Angle (°)
a = 162.600α = 90.00
b = 41.400β = 90.00
c = 39.800γ = 90.00
Software Package:
Software NamePurpose
XDSdata scaling
PHENIXphasing
REFMACrefinement
XDSdata reduction
HYSSphasing
autoSHARPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2006-09-04
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Version format compliance