2IYD

SENP1 covalent complex with SUMO-2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.288 
  • R-Value Work: 0.272 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Senp1 Native Structure

Dong, C.Naismith, J.H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
SENTRIN-SPECIFIC PROTEASE 1
A
226Homo sapiensMutation(s): 0 
Gene Names: SENP1
EC: 3.4.22.-
Find proteins for Q9P0U3 (Homo sapiens)
Go to Gene View: SENP1
Go to UniProtKB:  Q9P0U3
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
SMALL UBIQUITIN-RELATED MODIFIER 2
B
81Homo sapiensMutation(s): 0 
Gene Names: SUMO2 (SMT3B, SMT3H2)
Find proteins for P61956 (Homo sapiens)
Go to Gene View: SUMO2
Go to UniProtKB:  P61956
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.288 
  • R-Value Work: 0.272 
  • Space Group: P 32 2 1
Unit Cell:
Length (Å)Angle (°)
a = 143.376α = 90.00
b = 143.376β = 90.00
c = 71.886γ = 120.00
Software Package:
Software NamePurpose
REFMACrefinement
SCALAdata scaling
CCP4phasing
MOSFLMdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2006-08-08
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Version format compliance