2IQT

Crystal Structure of Fructose-Bisphosphate Aldolase, Class I from Porphyromonas gingivalis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.46 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.182 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Crystal Structure of Fructose-Bisphosphate Aldolase, Class I from Porphyromonas gingivalis

Kim, Y.Zhou, M.Moy, S.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Fructose-bisphosphate aldolase class 1
A
296Porphyromonas gingivalis (strain ATCC BAA-308 / W83)Mutation(s): 0 
Gene Names: fda (fbaB)
EC: 4.1.2.13
Find proteins for P60053 (Porphyromonas gingivalis (strain ATCC BAA-308 / W83))
Go to UniProtKB:  P60053
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.46 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.182 
  • Space Group: P 31 2 1
Unit Cell:
Length (Å)Angle (°)
a = 68.737α = 90.00
b = 68.737β = 90.00
c = 154.113γ = 120.00
Software Package:
Software NamePurpose
HKL-2000data collection
HKL-2000data reduction
SHELXEmodel building
HKL-2000data scaling
HKL-3000phasing
SHELXCDphasing
PHENIXphasing
SOLVEphasing
SBC-Collectdata collection
MLPHAREphasing
REFMACrefinement
SHELXDphasing
RESOLVEphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2006-11-14
    Type: Initial release
  • Version 1.1: 2008-05-01
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Advisory, Source and taxonomy, Version format compliance
  • Version 1.3: 2017-10-18
    Type: Refinement description