2IPP

Crystal Structure of the tetragonal form of human liver cathepsin B


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal Structure of the tetragonal form of human liver cathepsin B

Huber, C.P.Campbell, R.L.Hasnain, S.Hirama, T.To, R.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Cathepsin B
A
47Homo sapiensMutation(s): 0 
Gene Names: CTSB (CPSB)
EC: 3.4.22.1
Find proteins for P07858 (Homo sapiens)
Go to Gene View: CTSB
Go to UniProtKB:  P07858
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Cathepsin B
B
205Homo sapiensMutation(s): 0 
Gene Names: CTSB (CPSB)
EC: 3.4.22.1
Find proteins for P07858 (Homo sapiens)
Go to Gene View: CTSB
Go to UniProtKB:  P07858
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PYS
Query on PYS

Download SDF File 
Download CCD File 
A
2-PYRIDINETHIOL
C5 H5 N S
WHMDPDGBKYUEMW-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • Space Group: P 43
Unit Cell:
Length (Å)Angle (°)
a = 85.580α = 90.00
b = 85.580β = 90.00
c = 34.390γ = 90.00
Software Package:
Software NamePurpose
X-PLORphasing
PROLSQrefinement
X-PLORmodel building

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2006-12-12
    Type: Initial release
  • Version 1.1: 2008-05-01
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance