2IAF

Crystal structure of a fragment (residues 11 to 161) of L-serine dehydratase from Legionella pneumophila


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.224 
  • R-Value Work: 0.195 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of a fragment (residues 11 to 161) of L-serine dehydratase from Legionella pneumophila

Nocek, B.Mulligan, R.Moy, S.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Hypothetical protein sdhL
A
151Legionella pneumophila (strain Lens)Mutation(s): 0 
Gene Names: sdhL
Find proteins for Q5WYB1 (Legionella pneumophila (strain Lens))
Go to UniProtKB:  Q5WYB1
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MG
Query on MG

Download SDF File 
Download CCD File 
A
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.224 
  • R-Value Work: 0.195 
  • Space Group: I 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 56.319α = 90.00
b = 76.835β = 90.00
c = 108.135γ = 90.00
Software Package:
Software NamePurpose
HKL-3000phasing
ARP/wARPmodel building
SHELXDphasing
SBC-Collectdata collection
RESOLVEphasing
HKL-2000data reduction
SHELXEmodel building
MLPHAREphasing
SOLVEphasing
Cootmodel building
DMphasing
Omodel building
HKL-2000data scaling
CCP4phasing
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2006-10-10
    Type: Initial release
  • Version 1.1: 2008-05-01
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Advisory, Version format compliance