2H73

Crystal Structure of Thioredoxin Mutant D43E in Hexagonal (p61) Space Group


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.278 
  • R-Value Work: 0.209 

wwPDB Validation 3D Report Full Report


This is version 1.4 of the entry. See complete history

Literature

Crystal Structure of Thioredoxin Mutant D43E in Hexagonal (p61) Space Group

Godoy-Ruiz, R.Gavira, J.A.Ibarra-Molero, B.Sanchez-Ruiz, J.M.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Thioredoxin
A, B
108Escherichia coli (strain K12)Mutations: E43D
Gene Names: trxA (fipA, tsnC)
Find proteins for P0AA25 (Escherichia coli (strain K12))
Go to UniProtKB:  P0AA25
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MPD
Query on MPD

Download SDF File 
Download CCD File 
A
(4S)-2-METHYL-2,4-PENTANEDIOL
C6 H14 O2
SVTBMSDMJJWYQN-YFKPBYRVSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.278 
  • R-Value Work: 0.209 
  • Space Group: P 61
Unit Cell:
Length (Å)Angle (°)
a = 102.991α = 90.00
b = 102.991β = 90.00
c = 42.445γ = 120.00
Software Package:
Software NamePurpose
XPREPdata reduction
Cootmodel building
SADABSdata scaling
PDB_EXTRACTdata extraction
MOLREPphasing
REFMACrefinement
SAINTdata scaling
PROTEUM PLUSdata reduction
MolProbitymodel building

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2007-05-15
    Type: Initial release
  • Version 1.1: 2008-05-01
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Advisory, Version format compliance
  • Version 1.3: 2012-05-02
    Type: Structure summary
  • Version 1.4: 2017-10-18
    Type: Refinement description