2G27

Ketopiperazine-Based Renin Inhibitors: Optimization of the "C" Ring


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.310 
  • R-Value Work: 0.230 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Ketopiperazine-Based Renin Inhibitors: Optimization of the "C" Ring

Holsworth, D.D.Cai, C.Cheng, X.M.Cody, W.L.Downing, D.M.Erasga, N.Lee, C.Powell, N.A.Ednunds, J.J.Stier, M.Jalaie, M.Zhang, E.McConnell, P.Ryan, M.J.Bryant, J.Li, T.Kasani, A.Hall, E.Subedi, R.Rahim, M.Maiti, S.

(2006) BIOORG.MED.CHEM.LETT. 16: 2500-2504

  • DOI: 10.1016/j.bmcl.2006.01.084
  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • A systematic investigation of the S3 sub-pocket activity requirements was conducted. It was observed that linear and sterically small side chain substituents are preferred in the S3 sub-pocket for optimal renin inhibition. Polar groups in the S3-sub- ...

    A systematic investigation of the S3 sub-pocket activity requirements was conducted. It was observed that linear and sterically small side chain substituents are preferred in the S3 sub-pocket for optimal renin inhibition. Polar groups in the S3-sub-pocket were not well tolerated and caused a reduction in renin inhibitory activity. Further, compounds with clog P's < or = 3 demonstrated a dramatic reduction in CYP3A4 inhibitory activity.


    Organizational Affiliation

    Pfizer Global Research and Development, Michigan Laboratories, Department of Chemistry, Ann Arbor, MI 48105, USA. Daniel.Holsworth@pfizer.com




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Renin
A, B
333Homo sapiensMutation(s): 0 
Gene Names: REN
EC: 3.4.23.15
Find proteins for P00797 (Homo sapiens)
Go to Gene View: REN
Go to UniProtKB:  P00797
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
4LG
Query on 4LG

Download SDF File 
Download CCD File 
A, B
METHYL (6-{[(2R)-1-(4-{3-[(2-METHOXYBENZYL)OXY]PROPOXY}PHENYL)-6-OXOPIPERAZIN-2-YL]METHOXY}-1H-INDOL-1-YL)ACETATE
C33 H37 N3 O7
KWJWTGNGIVRJJK-HHHXNRCGSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.310 
  • R-Value Work: 0.230 
  • Space Group: P 21 3
Unit Cell:
Length (Å)Angle (°)
a = 141.411α = 90.00
b = 141.411β = 90.00
c = 141.411γ = 90.00
Software Package:
Software NamePurpose
CNSrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2006-06-13
    Type: Initial release
  • Version 1.1: 2008-05-01
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance