Crystal structure of (np_880937.1) from BORDETELLA PERTUSSIS at 1.80 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
hypothetical protein BP2299 | 97 | Bordetella pertussis Tohama I | Mutation(s): 3  Gene Names: np_880937.1 | ||
UniProt | |||||
Find proteins for Q7VWF8 (Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)) Explore Q7VWF8  Go to UniProtKB:  Q7VWF8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q7VWF8 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
1PE Query on 1PE | K [auth C] | PENTAETHYLENE GLYCOL C10 H22 O6 JLFNLZLINWHATN-UHFFFAOYSA-N | |||
ZN Query on ZN | E [auth A], G [auth B], I [auth C], L [auth D] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
ACT Query on ACT | F [auth A], H [auth B], J [auth C], M [auth D] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 35.919 | α = 90 |
b = 92.651 | β = 106.4 |
c = 53.058 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
SCALA | data scaling |
PDB_EXTRACT | data extraction |
SOLVE | phasing |
SHARP | phasing |
DM | phasing |
RESOLVE | phasing |
MOSFLM | data reduction |
CCP4 | data scaling |