2FI9 | pdb_00002fi9

The crystal structure of an outer membrane protein from the Bartonella henselae

• PDB DOI: https://doi.org/10.2210/pdb2FI9/pdb

• Classification: MEMBRANE PROTEIN
• Organism(s): Bartonella henselae str. Houston-1
• Expression System: Escherichia coli BL21
• Mutation(s): No 


• Deposited: 2005-12-28 Released: 2006-02-14 
• Deposition Author(s): Zhang, R., Hatzos, C., Clancy, S., Collart, F., Cymborowski, M., Minor, W., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.80 Å
• R-Value Free: 
  0.234 (Depositor), 0.229 (DCC) 
• R-Value Work: 
  0.199 (Depositor), 0.197 (DCC) 
• R-Value Observed: 
  0.201 (Depositor) 

Literature

The 1.8A crystal structure of an outer membrane protein from the Bartonella henselae

Zhang, R., Hatzos, C., Clancy, S., Collart, F., Cymborowski, M., Minor, W., Joachimiak, A.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 14.02 kDa 
• Atom Count: 958 
• Modeled Residue Count: 118 
• Deposited Residue Count: 128 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Outer membrane protein	A	128	Bartonella henselae str. Houston-1	Mutation(s): 0  Gene Names: GI:49238164
UniProt
Find proteins for Q8RIU4 (Bartonella henselae) Explore Q8RIU4  Go to UniProtKB:  Q8RIU4

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.80 Å
• R-Value Free:  0.234 (Depositor), 0.229 (DCC) 
• R-Value Work:  0.199 (Depositor), 0.197 (DCC) 
• R-Value Observed: 0.201 (Depositor) 

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 34.527	α = 90
b = 51.931	β = 90
c = 62.368	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
SBC-Collect	data collection
HKL-2000	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2006-02-14 
Deposition Author(s): Zhang, R., Hatzos, C., Clancy, S., Collart, F., Cymborowski, M., Minor, W., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History  

• Version 1.0: 2006-02-14
  Type: Initial release
  
• Version 1.1: 2008-05-01
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Advisory, Source and taxonomy, Version format compliance
• Version 1.3: 2022-04-13
  Changes: Database references, Structure summary
• Version 1.4: 2024-02-14
  Changes: Data collection