2F84

Crystal Structure of an orotidine-5'-monophosphate decarboxylase homolog from P.falciparum


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.288 
  • R-Value Work: 0.227 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal Structure of an orotidine-5'-monophosphate decarboxylase homolog from Plasmodium falciparum

Caruthers, J.M.Robein, M.Zucker, F.Mehlin, C.Luft, J.Boni, E.Lauricella, A.Merritt, E.A.Hol, W.G.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
orotidine monophosphate decarboxylase
A
323Plasmodium falciparum (isolate 3D7)Mutation(s): 0 
EC: 4.1.1.23
Find proteins for Q8IJH3 (Plasmodium falciparum (isolate 3D7))
Go to UniProtKB:  Q8IJH3
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PO4
Query on PO4

Download SDF File 
Download CCD File 
A
PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.288 
  • R-Value Work: 0.227 
  • Space Group: P 21 21 2
Unit Cell:
Length (Å)Angle (°)
a = 70.911α = 90.00
b = 69.057β = 90.00
c = 69.735γ = 90.00
Software Package:
Software NamePurpose
EPMRphasing
PDB_EXTRACTdata extraction
REFMACrefinement
SCALAdata scaling
CCP4data scaling
MOSFLMdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2005-12-20
    Type: Initial release
  • Version 1.1: 2008-05-01
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Advisory, Derived calculations, Source and taxonomy, Version format compliance