2EXR

X-Ray Structure of Cytokinin Oxidase/Dehydrogenase (CKX) From Arabidopsis Thaliana AT5G21482


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.702 Å
  • R-Value Free: 0.214 
  • R-Value Work: 0.171 

wwPDB Validation 3D Report Full Report


This is version 1.4 of the entry. See complete history

Literature

Crystal structure of Arabidopsis thaliana cytokinin dehydrogenase.

Bae, E.Bingman, C.A.Bitto, E.Aceti, D.J.Phillips, G.N.

(2008) Proteins 70: 303-306


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Cytokinin dehydrogenase 7
A
524Arabidopsis thalianaMutation(s): 0 
Gene Names: CKX7 (CKX5)
EC: 1.5.99.12
Find proteins for Q9FUJ1 (Arabidopsis thaliana)
Go to UniProtKB:  Q9FUJ1
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
FAD
Query on FAD

Download SDF File 
Download CCD File 
A
FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.702 Å
  • R-Value Free: 0.214 
  • R-Value Work: 0.171 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 45.858α = 90.00
b = 114.502β = 90.00
c = 190.920γ = 90.00
Software Package:
Software NamePurpose
ARP/wARPmodel building
SHARPphasing
DENZOdata reduction
PHENIXphasing
SCALEPACKdata scaling
REFMACrefinement
SHELXDphasing
SOLOMONphasing
DMphasing
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2005-11-29
    Type: Initial release
  • Version 1.1: 2008-01-15
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance
  • Version 1.3: 2012-03-28
    Type: Database references
  • Version 1.4: 2017-10-18
    Type: Refinement description