2EQG | pdb_00002eqg

Solution structure of the first A20-type zinc finger domain from human tumor necrosis factor, alpha-induced protein3

• PDB DOI: https://doi.org/10.2210/pdb2EQG/pdb

• Classification: HYDROLASE
• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 2007-03-30 Released: 2007-10-02 
• Deposition Author(s): Zhang, H.P., Hayahsi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations, structures with the lowest energy, target function 

Literature

Solution structure of the first A20-type zinc finger domain from human tumor necrosis factor, alpha-induced protein3

Zhang, H.P., Hayashi, F., Yokoyama, S.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 5.28 kDa 
• Atom Count: 359 
• Modeled Residue Count: 49 
• Deposited Residue Count: 49 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Tumor necrosis factor, alpha-induced protein 3	A	49	Homo sapiens	Mutation(s): 0  Gene Names: TNFAIP3 EC: 3 (PDB Primary Data), 2.3.2 (UniProt), 3.4.19.12 (UniProt)
UniProt & NIH Common Fund Data Resources
Find proteins for P21580 (Homo sapiens) Explore P21580  Go to UniProtKB:  P21580
PHAROS:  P21580 GTEx:  ENSG00000118503

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN	B [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations, structures with the lowest energy, target function 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2007-10-02 
Deposition Author(s): Zhang, H.P., Hayahsi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History  

• Version 1.0: 2007-10-02
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2022-03-09
  Changes: Data collection, Database references, Derived calculations
• Version 1.3: 2024-05-29
  Changes: Data collection