2EDJ | pdb_00002edj

Solution structure of the fifth ig-like domain from human Roundabout homolog 2

PDB DOI: https://doi.org/10.2210/pdb2EDJ/pdb

Classification: CELL ADHESION
Organism(s): Homo sapiens
Mutation(s): No

Deposited: 2007-02-14 Released: 2007-08-14
Deposition Author(s): Kurosaki, C., Izumi, K., Yoshida, M., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: target function, structures with the lowest energy, structures with the least restraint violations

wwPDB Validation 3D Report Full Report

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This is version 1.3 of the entry. See complete history.

Literature

Solution structure of the fifth ig-like domain from human Roundabout homolog 2

Kurosaki, C., Izumi, K., Yoshida, M., Hayashi, F., Yokoyama, S.

To be published.

Macromolecule Content

Total Structure Weight: 10.32 kDa
Atom Count: 723
Modeled Residue Count: 100
Deposited Residue Count: 100
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Roundabout homolog 2	A	100	Homo sapiens	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q9HCK4 (Homo sapiens) Explore Q9HCK4 Go to UniProtKB: Q9HCK4
PHAROS: Q9HCK4 GTEx: ENSG00000185008
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9HCK4
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: target function, structures with the lowest energy, structures with the least restraint violations

Structure Validation

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Entry History

Deposition Data

Released Date: 2007-08-14

Deposition Author(s):

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History (Full details and data files)

Version 1.0: 2007-08-14
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2022-03-09
Changes: Data collection, Database references, Derived calculations
Version 1.3: 2024-10-23
Changes: Data collection, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.