2EDI | pdb_00002edi

Solution structure of the UQ_con domain from human NEDD8-conjugating enzyme NCE2

PDB DOI: https://doi.org/10.2210/pdb2EDI/pdb

Classification: LIGASE
Organism(s): Homo sapiens
Mutation(s): No

Deposited: 2007-02-14 Released: 2007-08-14
Deposition Author(s): Endo, H., Izumi, K., Yoshida, M., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations

wwPDB Validation 3D Report Full Report

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This is version 1.3 of the entry. See complete history.

Literature

Solution structure of the UQ_con domain from human NEDD8-conjugating enzyme NCE2

Endo, H., Izumi, K., Yoshida, M., Hayashi, F., Yokoyama, S.

To be published.

Macromolecule Content

Total Structure Weight: 19.51 kDa
Atom Count: 1,371
Modeled Residue Count: 173
Deposited Residue Count: 173
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
NEDD8-conjugating enzyme UBE2F	A	173	Homo sapiens	Mutation(s): 0 Gene Names: NCE2 EC: 6.3.2 (PDB Primary Data), 2.3.2.34 (UniProt)
UniProt & NIH Common Fund Data Resources
Find proteins for Q969M7 (Homo sapiens) Explore Q969M7 Go to UniProtKB: Q969M7
PHAROS: Q969M7 GTEx: ENSG00000184182
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q969M7
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations

Structure Validation

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Entry History

Deposition Data

Released Date: 2007-08-14

Deposition Author(s):

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History (Full details and data files)

Version 1.0: 2007-08-14
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2022-03-09
Changes: Data collection, Database references, Derived calculations
Version 1.3: 2024-05-29
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.