2E6R

Solution structure of the PHD domain in SmcY protein


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the least restraint violations, structures with the lowest energy, target function 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Solution structure of the PHD domain in SmcY protein

Kadirvel, S.He, F.Muto, Y.Inoue, M.Kigawa, T.Shirouzu, M.Terada, T.Yokoyama, S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Jumonji/ARID domain-containing protein 1D
A
92Homo sapiensMutation(s): 0 
Gene Names: KDM5D (HY, HYA, JARID1D, KIAA0234, SMCY)
EC: 1.14.11.-
Find proteins for Q9BY66 (Homo sapiens)
Go to Gene View: KDM5D
Go to UniProtKB:  Q9BY66
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the least restraint violations, structures with the lowest energy, target function 
  • Olderado: 2E6R Olderado

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2007-07-03
    Type: Initial release
  • Version 1.1: 2008-04-30
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance